Tags: bioinformatics

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Marine sciences professor receives NSF CAREER award

Holly Bik, assistant professor in the University of Georgia Franklin College of Arts and Science department of marine sciences with a joint appointment in UGA’s Institute of Bioinformatics, has received a grant from the National Science Foundation Faculty Early Career Development Program (CAREER) to study the biodiversity, evolution, and ecology of free-living marine nematodes and their host-associated microbiomes. The five-year, $1…

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Databases to help cure diseases

Jessica Kissinger is using her expertise in biology and big data to help other scientists. Today, the University of Georgia professor not only studies deadly pathogens like malaria and Cryptosporidium (a waterborne parasite), but also is a driving force behind worldwide, groundbreaking collaborations on novel databases. During her time at UGA, she has received nearly $40 million in federal and private grants and contracts. These databases can…

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New UGA study maps the structural diversity of sugar building enzymes using AI

Sugars in our bodies, and in nearly all living organisms, are synthesized and built by a large family of proteins called Glycosyltransferases (GTs) that adopt unique three-dimensional structures and folds to perform a diverse array of cellular functions. Understanding the structure and fold of these proteins is an important first step towards characterizing their functions, which is critical for developing effective glycovaccines and for…

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Kannan receives $2M NIH MIRA award

University of Georgia faculty member Natarajan Kannan is a recipient of a highly prestigious Maximizing Investigator Research Award, or MIRA, from the National Institute of General Medical Sciences. The MIRA award is intended to provide investigators with greater stability and flexibility in funding to enhance scientific productivity and make important scientific breakthroughs. The program funds research by the nation’s most highly…

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Ying Xu: Tracking the factors that influence tumor growth

Growing up in a family of scientists had a great effect on Ying Xu’s career. With two chemistry professors for parents, he was exposed to science at a very early age. However, it was his uncle, a computer scientist, who encouraged him to study computer science or mathematics. Xu obtained his Ph.D. in applied mathematics from the University of Colorado Boulder. During his doctoral studies, Xu knew very little about biology. Learning about…

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State of the Art Symposium on Collective Behavior March 20

From the coordinated blinking of fireflies to the synchronized movement of flocks of birds or schools of fish and even the exploration pattern of roots in the soil, collective behavior characters all domains of biology – animals, plants, fungi, bacteria and viruses. The University of Georgia Institute of Bioinformatics presents the State of the Art Symposium on Collective Behavior Friday, March 20, 2020 from 9 a.m. to 4 p.m. in Masters Hall…

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Sharing the Knowledge: NIH Award Supports Expanded Genomics Data Resource

A team led by scientists at the University of Pennsylvania and University of Georgia provides thousands of researchers around the world with access to the Eukaryotic Pathogen Genomics Database (EuPathDB.org), a collection of resources for analyzing large-scale datasets associated with microbial pathogens. These include the parasites responsible for malaria, sleeping sickness, and toxoplasmosis; the fungi responsible for thrush, aspergillosis and…

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Research enlivens the role of so-called ‘dead’ enzymes

Bioinformatics doctoral candidate Annie Kwon, working with UGA professor Natarajan Kannan and a team of researchers, is first author on a recent paper revealing that a class of enzymes previously thought to be useless is prevalent across all domains of life in fact serves an important purpose in cell communications: The study, published in Science Signaling, evolved from Kwon’s research trip to the University of…

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New open-access data resource supports collaboration in global infectious disease research

An international team of researchers has launched the Clinical Epidemiology Database, an open-access online resource enabling investigators to maximize the utility and reach of their data and to make optimal use of information released by infectious disease researchers around the world: The development of ClinEpiDB has been led by the University of Pennsylvania’s David Roos, the E. Otis Kendall Professor of Biology in the …

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Battling neglected diseases

Great overview of the work by Franklin College faculty in the Center for Tropical and Emerging Global Diseases, where multi-track efforts are yielding gains against some of the world's worst scourges: Founded 20 years ago by Regents Professor of Cellular Biology Rick Tarleton, CTEGD consolidates UGA’s extensive, campus-wide tropical disease knowledge and drug discovery expertise into an interdisciplinary research unit that focuses on…

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Researchers increase diversity in plants by reactivating dormant genes

A new breeding technique using a plant's own DNA could produce crops that are more resistant to drought and disease: A team of University of Georgia researchers has developed a new way to breed plants with better traits. By introducing a human protein into the model plant species Arabidopsis thaliana, researchers found that they could selectively activate silenced genes already present within the plant. Using this method to increase diversity…

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ClinEpiDB launch

An international team of researchers has launched the Clinical Epidemiology Database, an open-access online resource enabling investigators to maximize the utility and reach of their data and to make optimal use of information released by others: Population-based epidemiological studies provide new opportunities for innovation and collaboration among researchers addressing pressing global-health concerns. As with the vast quantities of…


CTL, biology faculty, team up to reduce textbook costs

Great news for students in our introductory biology courses: The University of Georgia Center for Teaching and Learning is looking at ways to save students money by offering free e-textbooks for introductory biology courses at UGA through a $25,000 University System of Georgia Incubator grant awarded this summer. UGA students who take the entry-level biology courses pay around $97 for a new biology textbook. This grant will collectively save…
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